Files in YingMa0107/CARD
Spatially Informed Cell Type Deconvolution for Spatial Transcriptomics
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
Overview.jpg
R/CARD.SCMapping.R
R/CARD.imputation.R
R/CARD.prop.R
R/CARD.refFree.R
R/RcppExports.R
R/hello.R
R/utilities.R
R/visualization.R
README.md
data/Figure4A_layer_annote.RData
data/README.md
data/markerList.RData
data/sc_count.RData
data/sc_meta.RData
data/spatial_count.RData
data/spatial_location.RData
docs/Overview1.jpg
docs/_config.yml
docs/documentation/01_About.md
docs/documentation/02_installation.md
docs/documentation/03_data.md
docs/documentation/04_CARD_Example.md
docs/documentation/05_Experiments.md
docs/documentation/Example_analysis_CARDfree_prop.png
docs/documentation/Example_analysis_Original_Gene.png
docs/documentation/Example_analysis_grid_Gene.png
docs/documentation/Example_analysis_grid_prop.jpg
docs/documentation/Example_analysis_grid_prop.png
docs/documentation/Example_analysis_grids.png
docs/documentation/Example_analysis_scMapping.png
docs/documentation/Example_analysis_visualizeCor.png
docs/documentation/Example_analysis_visualizePie.png
docs/documentation/Example_analysis_visualizeProp.jpeg
docs/documentation/Example_analysis_visualizeProp.png
docs/documentation/Example_analysis_visualizeProp_2CT.png
docs/documentation/screenshot_zhoulab.png
docs/index.md
docs/style.css
man/AssignSCcords.Rd
man/CARD-class.Rd
man/CARD-package.Rd
man/CARD.imputation.Rd
man/CARD.visualize.Cor.Rd
man/CARD.visualize.gene.Rd
man/CARD.visualize.pie.Rd
man/CARD.visualize.prop.2CT.Rd
man/CARD.visualize.prop.Rd
man/CARD_SCMapping.Rd
man/CARD_deconvolution.Rd
man/CARD_refFree.Rd
man/CARDfree-class.Rd
man/CARDfree.Rd
man/CARDref.Rd
man/MVN_CV.Rd
man/Sigma.Rd
man/createCARDObject.Rd
man/createCARDfreeObject.Rd
man/createscRef.Rd
man/getHighresCords.Rd
man/getWeightForCell.Rd
man/hello.Rd
man/normCoordsTrainTest.Rd
man/sampleGridWithin.Rd
man/sc_QC.Rd
man/selectInfo.Rd
src/CARD.so
src/CARDfree.cpp
src/CARDfree.o
src/CARDref.cpp
src/CARDref.o
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/RcppExports.o
vignettes/.gitignore
vignettes/my-vignette.Rmd
