generatePermutationNull: Generate random signatures for a null distribution by...

In YosefLab/FastProjectR: Functional interpretation of single cell RNA-seq latent manifolds

Generate random signatures for a null distribution by permuting the data

Description

Generate random signatures for a null distribution by permuting the data

Usage

generatePermutationNull(eData, sigData, num)

Arguments

eData	the data to use for the permutations
sigData	list of signature objects random signature sizes
num	the number of signatures to generate

Value

A list with two items:

randomSigs: a list of lists of Signature objects. Each sub-list represents permutation signatures generated for a specific size/balance

sigAssignments: named factor vector assigning signatures to random background groups

YosefLab/FastProjectR documentation built on Feb. 15, 2023, 6:21 a.m.