read_10x_h5_v3 | R Documentation |
Loads 10x output counts and converts expression to gene symbols
read_10x_h5_v3(h5_file, ensToSymbol = TRUE)
h5_file |
path to h5 file |
ensToSymbol |
bool denoting whether or not to perform label conversion |
This version uses the h5 file produced by "cellranger count"
This file is typically in a folder that looks like:
outs/filtered_feature_bc_matrices_h5.h5
a list with two items Expression: sparse count matrix with gene expression counts Antibody: sparse count matrix with antibody capture counts
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