Man pages for YuLab-SMU/DOSE
Disease Ontology Semantic and Enrichment analysis
| clusterSim | clusterSim |
| compareClusterResult-class | Class "compareClusterResult" This class represents the... |
| computeIC | compute information content |
| DataSet | Datasets |
| DOSE-package | DOSE: Disease Ontology Semantic and Enrichment analysis |
| doseSim | doSim |
| doSim | doSim |
| enrichDGN | Enrichment analysis based on the DisGeNET... |
| enrichDGNv | enrichDGN |
| enrichDO | DO Enrichment Analysis |
| enricher_internal | enrich.internal |
| enrichHPO | Enrichment analysis based on the DisGeNET... |
| enrichMPO | Enrichment analysis based on the DisGeNET... |
| enrichNCG | enrichNCG |
| enrichResult-class | Class "enrichResult" This class represents the result of... |
| EXTID2NAME | EXTID2NAME |
| gene2DO | convert Gene ID to DO Terms |
| geneID | geneID generic |
| geneInCategory | geneInCategory generic |
| geneSim | geneSim |
| GSEA_internal | GSEA_internal |
| gseaResult-class | Class "gseaResult" This class represents the result of GSEA... |
| gseDGN | DisGeNET Gene Set Enrichment Analysis |
| gseDO | DO Gene Set Enrichment Analysis |
| gseHPO | MPO Gene Set Enrichment Analysis |
| gseMPO | MPO Gene Set Enrichment Analysis |
| gseNCG | NCG Gene Set Enrichment Analysis |
| gsfilter | gsfilter |
| hpoSim | doSim |
| mclusterSim | mclusterSim |
| mpoSim | doSim |
| parse_ratio | parse_ratio |
| rebuildAnnoData | rebuiding annotation data |
| reexports | Objects exported from other packages |
| setReadable | setReadable |
| show-methods | show method |
| simplot | simplot |
| summary-methods | summary method |
| theme_dose | theme_dose |
