mp_select_as_tip-methods: select specific taxa level as rownames of MPSE

In YuLab-SMU/MicrobiotaProcess: A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework

select specific taxa level as rownames of MPSE

Description

select specific taxa level as rownames of MPSE

Usage

mp_select_as_tip(x, tip.level = "OTU")

## S4 method for signature 'MPSE'
mp_select_as_tip(x, tip.level = "OTU")

## S4 method for signature 'tbl_mpse'
mp_select_as_tip(x, tip.level = "OTU")

## S4 method for signature 'grouped_df_mpse'
mp_select_as_tip(x, tip.level = "OTU")

Arguments

x	MPSE object
tip.level	the taxonomy level, default is 'OTU'.

Examples

## Not run: 
data(mouse.time.mpse)
newmpse <- mouse.time.mpse %>%
           mp_select_as_tip(tip.level = Species)
newmpse

## End(Not run)

YuLab-SMU/MicrobiotaProcess documentation built on Nov. 8, 2024, 4:37 p.m.