fortify: fortify

In YuLab-SMU/enrichplot: Visualization of Functional Enrichment Result

fortify

Description

convert compareClusterResult to a data.frame that ready for plot

convert enrichResult object for ggplot2

Usage

## S3 method for class 'compareClusterResult'
fortify(
  model,
  data,
  showCategory = 5,
  by = "geneRatio",
  split = NULL,
  includeAll = TRUE,
  ...
)

## S3 method for class 'enrichResult'
fortify(
  model,
  data,
  showCategory = 5,
  by = "Count",
  order = FALSE,
  drop = FALSE,
  split = NULL,
  ...
)

Arguments

model	'enrichResult' or 'compareClusterResult' object
data	not use here
showCategory	Category numbers to show
by	one of Count and GeneRatio
split	separate result by 'split' variable
includeAll	logical
...	additional parameter
order	logical
drop	logical

Value

data.frame

data.frame

Author(s)

Guangchuang Yu

YuLab-SMU/enrichplot documentation built on April 15, 2024, 5:18 p.m.