getCycTUInfo: Get one TU information
In YulongNiu/KEGG_BioCyc_API: A package for providing KEGG and BioCyc databases API in R
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
BioCyc Database API - Get TU information from BioCyc database.
Usage
1
getCycTUInfo(TUID, speID)
Arguments
TUID
A BioCyc TU ID with the length of 1.
speID
The BioCyc species ID, for example 'ECOLI' is for 'Escherichia coli K-12 substr. MG1655'.
Details
Get TU information including genes in TU and evidence.
There is another way to get the genes 'http://biocyc.org/apixml?fn=transcription-unit-genes&id=ECOLI:TU0-42328&detail=full'.
Value
A list of TU information.
Author(s)
Yulong Niu niuylscu@gmail.com
Examples
1
2
3
getCycTUInfo('TU0-6636', 'ECOLI')
getCycTUInfo('TU00260', 'ECOLI')
getCycTUInfo('TUC7Z-43', 'SMUT210007')
YulongNiu/KEGG_BioCyc_API documentation built on May 10, 2019, 1:13 a.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
BioCyc Database API - Get TU information from BioCyc database.
Usage
1 | getCycTUInfo(TUID, speID)
|
Arguments
TUID |
A BioCyc TU ID with the length of 1. |
speID |
The BioCyc species ID, for example 'ECOLI' is for 'Escherichia coli K-12 substr. MG1655'. |
Details
Get TU information including genes in TU and evidence. There is another way to get the genes 'http://biocyc.org/apixml?fn=transcription-unit-genes&id=ECOLI:TU0-42328&detail=full'.
Value
A list of TU information.
Author(s)
Yulong Niu niuylscu@gmail.com
Examples
1 2 3 | getCycTUInfo('TU0-6636', 'ECOLI')
getCycTUInfo('TU00260', 'ECOLI')
getCycTUInfo('TUC7Z-43', 'SMUT210007')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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