ZarnackGroup/BindingSiteFinder: Binding site defintion based on iCLIP data

Precise knowledge on the binding sites of an RNA-binding protein (RBP) is key to understand (post-) transcriptional regulatory processes. Here we present a workflow that describes how exact binding sites can be defined from iCLIP data. The package provides functions for binding site definition and result visualization. For details please see the vignette.

Getting started

Package details

Bioconductor views Coverage DataImport FunctionalGenomics GeneExpression GeneRegulation Sequencing
Maintainer
LicenseArtistic-2.0
Version1.99.14
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ZarnackGroup/BindingSiteFinder")
ZarnackGroup/BindingSiteFinder documentation built on Oct. 20, 2023, 2:14 p.m.