makeBsSummaryPlot: Plot binding site filter diagnostics

View source: R/PlotFunction.R

makeBsSummaryPlotR Documentation

Plot binding site filter diagnostics

Description

A diagnostic function that plots the number of binding sites retained after each filtering step calculated in makeBindingSites. The function makeBindingSites is expected to be executed prior to calling this plot function.

Usage

makeBsSummaryPlot(object)

Arguments

object

a BSFDataSet object

Value

a plot of type ggplot

See Also

makeBindingSites

Examples

# load clip data
files <- system.file("extdata", package="BindingSiteFinder")
load(list.files(files, pattern = ".rda$", full.names = TRUE))
bds = makeBindingSites(object = bds, bsSize = 9)
makeBsSummaryPlot(bds)


ZarnackGroup/BindingSiteFinder documentation built on May 31, 2024, 3:29 a.m.