getSignal: Accessor method for the signal data of the BSFDataSet object

In ZarnackGroup/BindingSiteFinder: Binding site defintion based on iCLIP data

Accessor method for the signal data of the BSFDataSet object

Description

Signal data is loaded from the path specified in getMeta columns "clPlus" and "clMinus" and stored as a list of RLE lists.

Usage

getSignal(object)

## S4 method for signature 'BSFDataSet'
getSignal(object)

Arguments

object

a BSFDataSet object

Value

returns the signal data, as list of RLE list for each strand, named after the meta data columns "clPlus" and "clMinus"

See Also

getMeta BSFDataSet

Examples

# load data
files <- system.file("extdata", package="BindingSiteFinder")
load(list.files(files, pattern = ".rda$", full.names = TRUE))

getSignal(bds)

ZarnackGroup/BindingSiteFinder documentation built on Nov. 24, 2024, 10:41 a.m.