add_ReadGroups_with_picard: Add Read Groups to SAM files using Picard tools

Description Usage Arguments

Description

Add Read Groups to SAM files using Picard tools

Usage

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add_ReadGroups_with_picard(input_BAM, output_BAM, read_group_lib,
  read_group_platform, read_group_barcode, read_group_sample)

Arguments

input_BAM

specify the input BAM file

output_BAM

specify the output BAM file

read_group_lib

set the read group library value with a character

read_group_platform

set the read group platform value with a character

read_group_barcode

set the read group barcode value with a character

read_group_sample

set the read group sample value with a character


abshah/RADseqR documentation built on May 10, 2019, 5:08 a.m.