process_ddradtags_from_stacks: Process radtags with Stacks

Description Usage Arguments

Description

Process radtags with Stacks

Usage

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process_ddradtags_from_stacks(path_to_input_files, barcode_file, output_dir,
  enzyme1, enzyme2, phred_value)

Arguments

path_to_input_files

Absolute path to input files (as a character)

barcode_file

File name of a plain text file with all barcodes for samples (as a character)

output_dir

Absolute path for output files (as a character)

enzyme1

1st Restriction enzyme used for the assay (as a character)

enzyme2

2nd Restriction enzyme used for the assay (as a character)


abshah/RADseqR documentation built on May 10, 2019, 5:08 a.m.