execute_velvet_script_from_stacks: Execute Velvet from Stacks
In abshah/RADseqR:
Description
Execute Velvet from Stacks
Usage
1
2
execute_velvet_script_from_stacks(sort_read_pairs_output, output_dir,
min_contig_size)
Arguments
sort_read_pairs_output
output from sort_read_pairs from stacks
output_dir
output directory
min_contig_size
miniumum size of contigs. Note: this is sensitive to sample read size
abshah/RADseqR documentation built on May 10, 2019, 5:08 a.m.
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Description
Execute Velvet from Stacks
Usage
1 2 | execute_velvet_script_from_stacks(sort_read_pairs_output, output_dir,
min_contig_size)
|
Arguments
sort_read_pairs_output |
output from sort_read_pairs from stacks |
output_dir |
output directory |
min_contig_size |
miniumum size of contigs. Note: this is sensitive to sample read size |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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