Files in adamsardar/metaDEGth
Combining differential expression P-values in a statistically consistent fashion whilst respecting background signal/noise trends

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/BetaUniformModel_S4Class.R R/Pvalues_S4Class.R R/TTRUST_TFtarget_relationships.R R/WZ4002_adrH1975_diffexDT.R R/betaUniformPvalueSumTest.R R/betaUniformScore.R R/cas9OCT4_hsZygote_diffexDT.R R/erlotinib_adrHCC827_diffexDT.R R/fishersPvalueSumTest.R R/fitBetaUniformModel.R R/koATF3_HCT116_diffexDT.R R/metaDEG.R R/metaDEGth-package.R R/plot.BetaUniformModel.R R/siTAZdiffex_HFL1_diffexDT.R R/validators.R README.md analysis/OCT4ko_enrichmentAnalysis.Rmd analysis/README.md analysis/WZ4002_enrichmentAnalysis.Rmd analysis/siTAZknockdown_enrichmentAnalysis.Rmd data-raw/ATF3knockout_HCT116CellLine.Rmd data-raw/OCT4knockout_humanCellLine.Rmd data-raw/TF_siRNA_knockdowns_GSE50588_summary.R data-raw/TTRUST_TFtarget_relationships.Rmd data-raw/WZ4002ADR_NCIH1975.Rmd data-raw/eroltinibADR_HCC827.Rmd data-raw/exploringExpM.Rmd data-raw/extractRegulonsFromGSE50588.Rmd data-raw/gefitinibADR_PC9.Rmd data-raw/pathbank_datasource.Rmd data-raw/prepareBioPlanetPathways.Rmd data-raw/siRNA_TAZknockdown_fibroblastCellLine.Rmd data-raw/testingAgainstNull.Rmd
data/TTRUST_TF2targets_DT.RData
data/WZ4002_adrH1975_diffexDT.RData
data/bioplanetPathwaysDT.RData
data/cas9OCT4_hsZygote_diffexDT.RData
data/erlotinib_adrHCC827_diffexDT.RData
data/hsPathBankProteinSets_DT.RData
data/koATF3_HCT116_diffexDT.RData
data/siTAZdiffex_HFL1_diffexDT.RData
tests/testthat.R tests/testthat/test-BetaUniformModelClass.R tests/testthat/test-BetaUniformPvalueSum.R tests/testthat/test-BetaUniformScore.R tests/testthat/test-FisherPvalueSum.R tests/testthat/test-fitBetaUniformParameters.R
adamsardar/metaDEGth documentation built on Oct. 26, 2020, 2:21 a.m.