getMAFofSplitVariablesTree: returns minor allele frequencies
In adibender/rFtools: Tools for the analysis of Random Forests (and cforest)

Description Usage Arguments Value See Also

For each not terminal node in the tree this functions returns the minor allele frequency (MAF) of the variable used for splitting in the according node.

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getMAFofSplitVariablesTree(splitVariablesTree = numeric(), 
	mafIntervals = list(maf0.05 = 1:50, maf0.10 = 51:100, 
	maf0.25 = 101:150, maf0.40 = 151:200))

`splitVariablesTree`	A `vector` containing the indices of the variables used for splitting in the tree.
`mafIntervals`	A `list` with each element giving the indices of variables being simulated with the according MAF. Depends on how the data was simulated in `simulateSNPdata`.

A vector of the same length as number of not terminal nodes in the tree. Contains the MAFs of the variables used for splitting in the according nodes.

getMAFofSplitVariablesForest, getSplitVariablesForest

adibender/rFtools documentation built on May 14, 2019, 5:13 a.m.