simulateAndSafe: wraper to create all objects needed for the further (meta-)...
In adibender/rFtools: Tools for the analysis of Random Forests (and cforest)

Description Usage Arguments See Also

This wrapper simulates a data set, performs randomForest and extracts category frequency information and safes the according objects to the hard drive.

simulateAndSafe(seed = 123, n.obs = 500, n.snp = 200, 
	maf = rep(c(0.05, 0.1, 0.25, 0.4), each = 50), ntree = 500, 
	path = "~/", subpaths = c("SNPdata/", "rF/", "cforest/", "cF/"), 
	outprefix = "")

`seed`	The seed to be used in data simulation.
`n.obs`	A `integer`. The number of observations.
`n.snp`	A `integer`. The number of SNPs.
`maf`	A `numeric` of length `n.snps` indicating the MAF with which the according SNP should be simulated.
`ntree`	Passed to `randomForest`.
`path`	The path in which to create the object sub-folders and save the objects to.
`subpaths`	The names of the folders where the according objects will be saved to.
`outprefix`	A `character` to prefix all object names when they are saved. Usually not needed, because the `seed` used in the function call will also be part of the names.