find_rna_polya_crude_start_end: Find the crude start and end of polyA tail in RNA read
In adnaniazi/tailfindr: Poly(A) Tail Length Estimator for Oxford Nanopore RNA and DNA Reads
View source: R/find-rna-polya-crude-start-end.R
find_rna_polya_crude_start_end R Documentation
Find the crude start and end of polyA tail in RNA read
Description
Find the crude start and end of polyA tail in RNA read
Usage
find_rna_polya_crude_start_end(rle_lengths, rle_values, rle_indices,
trough_threshold)
Arguments
rle_lengths
a numeric vector. A vector of RLE lengths in samples
rle_values
a logical vector. A vector of logical RLE values
rle_indices
a numeric vector. A vector if cumsum of RLE lengths
trough_threshold
a numeric. The threshold below which to merge sections
Value
a list
adnaniazi/tailfindr documentation built on March 23, 2024, 7:07 a.m.
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View source: R/find-rna-polya-crude-start-end.R
| find_rna_polya_crude_start_end | R Documentation |
Find the crude start and end of polyA tail in RNA read
Description
Find the crude start and end of polyA tail in RNA read
Usage
find_rna_polya_crude_start_end(rle_lengths, rle_values, rle_indices,
trough_threshold)
Arguments
rle_lengths |
a numeric vector. A vector of RLE lengths in samples |
rle_values |
a logical vector. A vector of logical RLE values |
rle_indices |
a numeric vector. A vector if cumsum of RLE lengths |
trough_threshold |
a numeric. The threshold below which to merge sections |
Value
a list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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