mkdocs/src/documentation.md

In aiminy/ModifiedDOSE: Disease Ontology Semantic and Enrichment analysis

Vignettes

• GOSemSim: An introduction to GOSemSim
• DOSE introduction
• DOSE semantic similarity analysis
• Disease enrichment analysis
• Disease GSEA

Blog posts

News and updates

• R package DOSE released
• DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis
• BioC 3.1: NEWS of my BioC packages
• BioC 3.2: NEWS of my BioC packages
• BioC 3.3: NEWS of my BioC packages
• BioC 3.4: NEWS of my BioC packages

Enrichment analysis

• NCG enrichment implemented in DOSE bioinfoblog.it
• functional enrichment for GTEx paper
• functional enrichment analysis with NGS data
• leading edge analysis
• why clusterProfiler fails
• Comparison of clusterProfiler and GSEA-P

Visualization

• dotplot for enrichment result
• enrichment map

Find out more on https://guangchuangyu.github.io/tags/dose.

aiminy/ModifiedDOSE documentation built on May 10, 2019, 7:36 a.m.