unmixing_quality_report: Create an unmixing quality report for simplex samples

Description Usage Arguments Details

View source: R/reports.R

Description

export_path should be the path to an export folder containing component data files for singleplex samples. An unmixing quality report is created for the samples and saved in the source directory.

Usage

1

Arguments

export_path

Path to a directory containing component_data files.

Details

The report generator tries to identify the Opal fluor for each source file by looking at the file name. It recognizes "DAPI", "AF", "Opalnnn" and "Opal_nnn". It also recognizes three leading digits as the number of an Opal fluor.


akoyabio/phenoptrReports documentation built on Jan. 17, 2022, 6:22 p.m.