write_summary_report: Create a summary report for a cell seg data file

Description Usage Arguments

View source: R/reports.R

Description

Creates an HTML report summarizing the slides, fields and phenotypes in a single cell seg data file.

Usage

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write_summary_report(
  csd_path = NULL,
  csd = NULL,
  dataset_name = NULL,
  output_path
)

Arguments

csd_path

Path to cell seg data file, or NULL.

csd

Cell seg table, or NULL.

dataset_name

Descriptive name of the dataset.

output_path

Path to write the resulting HTML file.


akoyabio/phenoptrReports documentation built on Jan. 17, 2022, 6:22 p.m.