get_gbif_taxa_tree: Create 'biomonitoR' dataset from GBIF

In alexology/biomonitoR: biomonitoring indices and metrics

Create biomonitoR dataset from GBIF

Description

Function to create a reference dataset using API from the Global Biodiversity Information Facility (GBIF).

Usage

get_gbif_taxa_tree(x, ref_from_tree = FALSE)

Arguments

x	Vector containing your taxa list.
ref_from_tree	Create a reference database in the biomonitoR format. See ref_from_tree.

See Also

as_biomonitor

Examples

## Not run: 

data(macro_ex)
dfref_gbif <- get_gbif_taxa_tree(macro_ex[, "Taxa"])
data_asb <- as_biomonitor(macro_ex, dfref = dfref_gbif$taxonomy)
data_agg <- aggregate_taxa(data_asb)

## End(Not run)

alexology/biomonitoR documentation built on Oct. 10, 2024, 12:02 a.m.