API for alexology/biomonitoR
biomonitoring indices and metrics

Global functions
.onAttach	Source code
Pi	Source code
Tree	Man page
abu	Source code
abuTax	Man page Source code
abundance	Man page Source code
abundance_classes	Man page Source code
addBiasToTraits	Man page Source code
add_bias_to_traits	Man page Source code
agg_fun	Source code
aggregate_taxa	Man page Source code
aggregatoR	Man page Source code
allindices	Man page Source code
allrich	Man page Source code
ambiguousSolver	Man page Source code
as.data.frame.asb	Source code
asBiomonitor	Man page Source code
as_biomonitor	Man page Source code
aspt	Man page Source code
assign_traits	Man page Source code
average_traits	Man page Source code
berpar	Man page Source code
bin	Man page Source code
bioco	Man page Source code
bmwp	Man page Source code
bray_curtis	Source code
brill	Man page Source code
capWords	Source code
checkBmwpFam	Source code
checkTree	Source code
classCheck	Source code
combTaxa	Man page Source code
combine_taxa	Man page Source code
convert_to_biotic	Man page Source code
convert_to_vegan	Man page Source code
convertobiotic	Man page Source code
convertovegan	Man page Source code
countWords	Source code
csi	Man page Source code
cwm	Man page Source code
ddis	Source code
defunct	Man page
dehli	Man page Source code
delta	Source code
delta.st	Source code
dness	Man page Source code
epsi	Man page Source code
ept	Man page Source code
eptd	Man page Source code
esimpson	Man page Source code
f_disp	Man page Source code
f_divs	Man page Source code
f_eve	Man page Source code
f_red	Man page Source code
f_rich	Man page Source code
fdisp_k	Source code
feve_k	Source code
fisher	Man page Source code
flow_t	Man page Source code
fric_3d	Source code
fuzzy_trait_ratio	Man page Source code
general_info	Man page Source code
get_gbif_taxa_tree	Man page Source code
get_iucn_taxa_tree	Man page Source code
get_nbn_taxa_tree	Man page Source code
get_taxa_abundance	Man page Source code
get_taxa_richness	Man page Source code
get_worms_taxa_tree	Man page Source code
ibmr	Man page Source code
igold	Man page Source code
indval_biomonitor	Source code
invberpar	Man page Source code
invsimpson	Man page Source code
life	Man page Source code
macro_ex	Man page
manageTraits	Man page Source code
manage_exceptions	Source code
manage_inconsistencies	Source code
manage_traits	Man page Source code
margalef	Man page Source code
mcintosh	Man page Source code
menhinick	Man page Source code
mi_prin	Man page
nearest	Source code
nearest_neg	Source code
nearest_neg_pos	Source code
nearest_pos	Source code
nearest_pos_neg	Source code
newDictio	Source code
oglio	Man page
om	Source code
only_char	Source code
pcoaQuality	Source code
pielou	Man page Source code
plot.asb	Man page Source code
plot.biomonitoR	Man page Source code
plot_indicator_taxa	Man page Source code
print.asb	Source code
psi	Man page Source code
qfs	Source code
quickRename	Man page Source code
quick_rename	Man page Source code
refFromTree	Man page Source code
ref_from_tree	Man page Source code
remove_taxa	Man page Source code
ricTax	Man page Source code
richness	Man page Source code
sampleTraits	Man page Source code
sample_traits	Man page Source code
selectPcoaAxes	Man page Source code
select_pcoa_axes	Man page Source code
shannon	Man page Source code
show_scores	Man page Source code
showscores	Man page Source code
silhouette_biomonitor	Source code
simpson	Man page Source code
solve_ambiguous	Man page Source code
specieName	Source code
specieWorms	Source code
subset.asb	Man page Source code
suggestUserNames	Source code
to_bin	Man page Source code
totInfo	Man page Source code
traitS	Source code
traitScaling	Man page Source code
traitsMean	Man page Source code
traits_mf	Man page
trim	Source code
tsi	Man page Source code
upperFirst	Source code
whpt	Man page Source code
zero_dist_traits	Source code