API for alexpiper/seqateurs
Tools for trimming and processing sequence data

Global functions
%>% Man page
.findExecutable Man page Source code
align_overlap Man page Source code
bbdemux Man page Source code
bbdemux2 Man page Source code
bbmap_install Man page Source code
bbsplit Man page Source code
bbsplit2 Man page Source code
bbtrim Man page Source code
bbtrim2 Man page Source code
clr Man page Source code
clrInv Man page Source code
cluster_otus Man page Source code
coalesce_join Man page Source code
codon_filter Man page Source code
create_logsheet Man page
create_mismatch Man page Source code
create_samplesheet Man page Source code
estimate_trunclen Man page
expit Man page Source code
fast_melt Man page Source code
fastqc Man page Source code
fastqc_install Man page Source code
get_qual_stats Man page
get_reading_frame Man page Source code
gm_mean Man page Source code
logit Man page Source code
lowest_classified Man page Source code
n_overlap Man page Source code
na_to_unclassified Man page Source code
parse_aqhist Man page Source code
parse_bbdemux Man page Source code
parse_bbtrim Man page Source code
parse_bhist Man page Source code
parse_gchist Man page Source code
parse_lhist Man page Source code
parse_qhist Man page Source code
parse_seqrun Man page
plot_lengths Man page Source code
plot_maxEE Man page Source code
plot_quality Man page Source code
propagate_tax Man page Source code
proportions Man page Source code
ps_to_dnabin Man page
ps_to_fasta Man page Source code
summarise_index Man page Source code
summarise_taxa Man page Source code
unclassified_to_na Man page Source code
alexpiper/seqateurs documentation built on July 9, 2023, 7:21 a.m.