run_deseq2: run_deseq2
In alextkalinka/delboy: Differential-representation analysis by Elastic-net Logistic regression with BinOmial-thinning validitY tests
Description
Usage
Arguments
Value
Description
Runs DESeq2 on normalized, batch-corrected data containing two groups to be contrasted.
Usage
1
run_deseq2(data, group_1, group_2, gene_column)
Arguments
data
A data frame containing normalized count data.
group_1
A character vector naming the columns that belong to group 1.
group_2
A character vector naming the columns that belong to group 2.
gene_column
A character string naming the column containing gene names.
Value
A data frame containing DESeq2 results.
alextkalinka/delboy documentation built on Feb. 2, 2022, 4:19 p.m.
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Description Usage Arguments Value
Description
Runs DESeq2 on normalized, batch-corrected data containing two groups to be contrasted.
Usage
1 | run_deseq2(data, group_1, group_2, gene_column)
|
Arguments
data |
A data frame containing normalized count data. |
group_1 |
A character vector naming the columns that belong to group 1. |
group_2 |
A character vector naming the columns that belong to group 2. |
gene_column |
A character string naming the column containing gene names. |
Value
A data frame containing DESeq2 results.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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