plot_species_specific_ogs: Plot number of species-specific orthogroups
In almeidasilvaf/cogeqc: Systematic quality checks on comparative genomics analyses
View source: R/visualization.R
plot_species_specific_ogs R Documentation
Plot number of species-specific orthogroups
Description
Plot number of species-specific orthogroups
Usage
plot_species_specific_ogs(stats_list = NULL)
Arguments
stats_list
A list of data frames with Orthofinder summary stats
as returned by the function read_orthofinder_stats.
Value
A ggplot object with a barplot of number of species-specific
orthogroups for each species.
Examples
dir <- system.file("extdata", package = "cogeqc")
stats_list <- read_orthofinder_stats(dir)
plot_species_specific_ogs(stats_list)
almeidasilvaf/cogeqc documentation built on Jan. 29, 2024, 7:20 a.m.
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View source: R/visualization.R
| plot_species_specific_ogs | R Documentation |
Plot number of species-specific orthogroups
Description
Plot number of species-specific orthogroups
Usage
plot_species_specific_ogs(stats_list = NULL)
Arguments
stats_list |
A list of data frames with Orthofinder summary stats
as returned by the function |
Value
A ggplot object with a barplot of number of species-specific orthogroups for each species.
Examples
dir <- system.file("extdata", package = "cogeqc")
stats_list <- read_orthofinder_stats(dir)
plot_species_specific_ogs(stats_list)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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