matches-class: Class "matches"

Description Objects from the Class Slots Author(s) See Also Examples

Description

This object contains the name of the input motif and all the matches found.

Objects from the Class

Objects can be created by calls of the form new("matches", name, aligns, similarity, valid).

Slots

name

Motif name.

aligns

Alignments found by motifMatch.

similarity

The optional name given to the motif.

valid

The alignment that should be considered as valid.

Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

See Also

motiv , alignments, tf

Examples

1
showClass("matches")

alyst/MotIV documentation built on May 12, 2019, 2:33 a.m.