count_d5_d3: Count RPFs by 5' and 3' digest lengths
In amandamok/choros: Bias Correction for Ribosome Profiling Data
count_d5_d3 R Documentation
Count RPFs by 5' and 3' digest lengths
Description
Count number of RPFs per combination of 5' and 3' digest lengths
Usage
count_d5_d3(bam_dat, plot_title = "")
Arguments
bam_dat
data frame; output from 'load_bam'
plot_title
character; title for heatmap plot
Value
A list containing a data frame of RPF counts by 5' and 3' digest
lengths, and ggplot heatmap of RPF counts
amandamok/choros documentation built on March 15, 2023, 7:57 p.m.
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| count_d5_d3 | R Documentation |
Count RPFs by 5' and 3' digest lengths
Description
Count number of RPFs per combination of 5' and 3' digest lengths
Usage
count_d5_d3(bam_dat, plot_title = "")
Arguments
bam_dat |
data frame; output from 'load_bam' |
plot_title |
character; title for heatmap plot |
Value
A list containing a data frame of RPF counts by 5' and 3' digest lengths, and ggplot heatmap of RPF counts
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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