fortify.zifnetwork: Derive global properties of network fit
In amcdavid/SingleCellAnalysis: Tools for Analysis of Zero-Inflated, Continuous Data
Description
Usage
Arguments
Value
Description
.. content for ..
Usage
1
fortify.zifnetwork(fits, lc.range, ld.range, nknots = 20, ebic.lambda = 0)
Arguments
fits
fitZifNetwork object
lc.range
optional
ld.range
optional
nknots
ebic.lambda
lambda penalty for extended Bayesian Info Crit. (Rigel and Drton)
Value
list with entries fortified, norm.grid, native.path
fortified and native.path are both data.frames with entries for each primerid, containing statistics of the fit as lambda varies.
fortified has cartesian product of continuous lambda values and discrete, over the same grid for each gene.
native.path has
amcdavid/SingleCellAnalysis documentation built on May 10, 2019, 10:27 a.m.
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Description Usage Arguments Value
Description
.. content for ..
Usage
1 | fortify.zifnetwork(fits, lc.range, ld.range, nknots = 20, ebic.lambda = 0)
|
Arguments
fits |
|
lc.range |
optional |
ld.range |
optional |
nknots |
|
ebic.lambda |
lambda penalty for extended Bayesian Info Crit. (Rigel and Drton) |
Value
list with entries fortified, norm.grid, native.path
fortified and native.path are both data.frames with entries for each primerid, containing statistics of the fit as lambda varies.
fortified has cartesian product of continuous lambda values and discrete, over the same grid for each gene.
native.path has
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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