modify_vlnplot: modified vlnplot

In amsszlh/scMC: Integrating and comparing multiple single cell genomic datasets

Description

modified vlnplot

Usage

modify_vlnplot(
  object,
  features,
  idents = NULL,
  split.by = NULL,
  cols = NULL,
  show.text.y = TRUE,
  line.size = NULL,
  pt.size = 0,
  plot.margin = margin(0, 0, 0, 0, "cm"),
  ...
)

Arguments

object	Seurat object
features	Features to plot (gene expression, metrics)
idents	Which classes to include in the plot (default is all)
split.by	Name of a metadata column to split plot by;
cols	defining the color for each cell group
show.text.y	whther show y-axis text
line.size	line width in the violin plot
pt.size	size of the dots
plot.margin	adjust the white space between each plot
...	pass any arguments to VlnPlot in Seurat

amsszlh/scMC documentation built on Jan. 2, 2021, 1:51 p.m.