fit_tcta: Fit regression model on toxicogenomic profile

Description Usage Arguments Value

View source: R/fit_tcta.R

Description

Fit regression model on toxicogenomic profile

Usage

1
fit_tcta(elist, extrema, nodeframe, cluster = c(TRUE, FALSE), cln = 2)

Arguments

elist

An EList containing normalized logFC values from one exposure experiment.

extrema

A dataframe containing extreme values for each node

nodeframe

a nodeframe describing the associations of genes in the toxicogenomic universe

cluster

Logical, if modeling should be parallelized

cln

Value

A dataframe with fitted model parameters for each node


anschue/toxprofileR documentation built on Nov. 2, 2019, 1:55 p.m.