get_hits_exons: Get Exon Hits
In anschue/toxprofileR: Functions for Retrieving Dynamic Toxicogenomic Fingerprints
Description
Usage
Arguments
Value
Description
Get Exon Hits
Usage
1
2
get_hits_exons(exon_bed, mart, maxmismatch, probelengths, name = "exon",
arraytype = c("regular", "Affy_ST"))
Arguments
exon_bed
path to .bed file
mart
biomart object
maxmismatch
maximum number of mismatches
probelengths
length of probes
name
database name
arraytype
"regular" or "Affy_ST"
Value
a data.frame containing probe-exon associations
anschue/toxprofileR documentation built on Nov. 2, 2019, 1:55 p.m.
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Description Usage Arguments Value
Description
Get Exon Hits
Usage
1 2 | get_hits_exons(exon_bed, mart, maxmismatch, probelengths, name = "exon",
arraytype = c("regular", "Affy_ST"))
|
Arguments
exon_bed |
path to .bed file |
mart |
biomart object |
maxmismatch |
maximum number of mismatches |
probelengths |
length of probes |
name |
database name |
arraytype |
"regular" or "Affy_ST" |
Value
a data.frame containing probe-exon associations
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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