glue_bowtie2_bamsort: Map with bowtie2 and output a sorted bam file
In araezopsis/ngscomander:
Description
Map with bowtie2 and output a sorted bam file
Usage
1
2
glue_bowtie2_bamsort(head_label, idx_dir = "./idx_bw2", core_num = 2,
in_dir = "./fastq", out_dir = "./mapped_by_bowtie2")
Arguments
head_label
.tar file path
idx_dir
.tar file path
core_num
.tar file path
in_dir
.tar file path
out_dir
.tar file path
araezopsis/ngscomander documentation built on Sept. 19, 2019, 2:22 a.m.
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Description
Map with bowtie2 and output a sorted bam file
Usage
1 2 | glue_bowtie2_bamsort(head_label, idx_dir = "./idx_bw2", core_num = 2,
in_dir = "./fastq", out_dir = "./mapped_by_bowtie2")
|
Arguments
head_label |
.tar file path |
idx_dir |
.tar file path |
core_num |
.tar file path |
in_dir |
.tar file path |
out_dir |
.tar file path |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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