glue_star_genome_generate: Generate genome index for STAR
In araezopsis/ngscomander:
Description
Generate genome index for STAR
Usage
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3
glue_star_genome_generate(idx_dir = "./idx_star",
fasta_path = "./allChr.fas",
gff_path = "./TAIR10_GFF3_genes_transposons.gff", core_num = 4)
Arguments
idx_dir
directory path for the indexing output
fasta_path
genome fasta file path for indexing
gff_path
.tar file path
core_num
number of cpu core
araezopsis/ngscomander documentation built on Sept. 19, 2019, 2:22 a.m.
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Description
Generate genome index for STAR
Usage
1 2 3 | glue_star_genome_generate(idx_dir = "./idx_star",
fasta_path = "./allChr.fas",
gff_path = "./TAIR10_GFF3_genes_transposons.gff", core_num = 4)
|
Arguments
idx_dir |
directory path for the indexing output |
fasta_path |
genome fasta file path for indexing |
gff_path |
.tar file path |
core_num |
number of cpu core |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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