Generate genome index for HISAT2
1 2 | glue_hisat_genome_generate(fasta_path = "./allChr.fas",
idx_name = "TAIR10", idx_dir = "./idx_hisat", core_num = 2)
|
fasta_path |
genome fasta file path for indexing |
idx_name |
index name |
idx_dir |
directory path for the indexing output |
core_num |
number of cpu core |
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