erccDbLiteFromFasta: create an ERCC annotation DB from the FASTA file NOTE: we...
In arcolombo/TxDbLite: Lightweight SQLite-based annotation classes/packages for use with arkas
View source: R/erccDbLiteFromFasta.R
Description
create an ERCC annotation DB from the FASTA file
NOTE: we probably shouldn't even bother exporting this.
If ERCC spike-ins change radically, we'll need to build an entirely new one.
Usage
1
erccDbLiteFromFasta(fastaFile, verbose = TRUE, dryRun = FALSE)
Arguments
fastaFile
a fasta file containing ERCC sequence information
verbose
boolean if true will print process messages
dryRun
boolean if false a sql-lite data base is saved, if true, no database is saved.
arcolombo/TxDbLite documentation built on July 10, 2020, 12:27 a.m.
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View source: R/erccDbLiteFromFasta.R
Description
create an ERCC annotation DB from the FASTA file NOTE: we probably shouldn't even bother exporting this. If ERCC spike-ins change radically, we'll need to build an entirely new one.
Usage
1 | erccDbLiteFromFasta(fastaFile, verbose = TRUE, dryRun = FALSE)
|
Arguments
fastaFile |
a fasta file containing ERCC sequence information |
verbose |
boolean if true will print process messages |
dryRun |
boolean if false a sql-lite data base is saved, if true, no database is saved. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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