derived_input-class: Class containing all data required for a Fagin run
In arendsee/fagin: Annotate Orphan Genes
Description
Class containing all data required for a Fagin run
Slots
treePhologenetic tree of all species in the analysis
focal_speciesThe focal species
queriesA character vector of gene ids (orphan candidates, or whatever)
controlA character vector of gene ids (control)
speciesA list of species_meta objects
synteny_mapsA list of synteny maps
arendsee/fagin documentation built on Aug. 27, 2019, 11:58 a.m.
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Description
Class containing all data required for a Fagin run
Slots
treePhologenetic tree of all species in the analysis
focal_speciesThe focal species
queriesA character vector of gene ids (orphan candidates, or whatever)
controlA character vector of gene ids (control)
speciesA list of species_meta objects
synteny_mapsA list of synteny maps
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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