hist.bum: Histogram of the p-value distribution with the fitted bum...

In assaron/BioNet: Routines for the functional analysis of biological networks

Description

The function plots a histogram of the p-values together with the fitted bum-model.

Usage

## S3 method for class 'bum'
hist(x, breaks=50, main="Histogram of p-values", xlab="P-values", ylab="Density", ...)

Arguments

x	Maximum likelihood estimator object of the beta-uniform mixture fit.
breaks	Breaks for the histogram.
main	An overall title for the plot.
xlab	A title for the x axis.
ylab	A title for the y axis.
...	Other graphic parameters for the plot.

Author(s)

Daniela Beisser

See Also

fitBumModel, hist.bum, bumOptim

Examples

data(pvaluesExample)
pvals <- pvaluesExample[,1]
mle <- fitBumModel(pvals, plot=FALSE)
hist(mle)

assaron/BioNet documentation built on Sept. 18, 2020, 12:02 a.m.