plot.bum: Quantile-quantile plot for the beta-uniform mixture model

In assaron/BioNet: Routines for the functional analysis of biological networks

Description

The function plot the theoretical quantiles of the fitted bum model against the quantiles of the observed p-value distribution.

Usage

## S3 method for class 'bum'
plot(x, main="QQ-Plot", xlab="Estimated p-value", ylab="Observed p-value", ...)

Arguments

x	Maximum likelihood estimation object of the fitted bum model.
main	An overall title for the plot.
xlab	A title for the x axis.
ylab	A title for the y axis.
...	Other graphic parameters for the plot.

Author(s)

Daniela Beisser

See Also

fitBumModel, plot.bum, bumOptim

Examples

data(pvaluesExample)
pvals <- pvaluesExample[,1]
mle <- fitBumModel(pvals, plot=FALSE)
plot(mle)

assaron/BioNet documentation built on Sept. 18, 2020, 12:02 a.m.