iso_compute_stats: Compute stats on isoform expression relative to the total...
In atienza-ipmc/isoswitch: What the Package Does (One Line, Title Case)
iso_compute_stats R Documentation
Compute stats on isoform expression relative to the total expression of a gene.
Flags major and top (most expressed) transcripts
Description
Compute stats on isoform expression relative to the total expression of a gene.
Flags major and top (most expressed) transcripts
Usage
iso_compute_stats(count_matrix, count_zeros = TRUE)
Arguments
count_matrix
Count matrix of seurat object
count_zeros
if TRUE (default), features with zero expression are included in the stats
Value
data.frame with feature/gene_id/transcript_id, (sum) at transcript level
relative percentage (perc) over total gene expression, boolean flags for major
(maj) and top isoforms
atienza-ipmc/isoswitch documentation built on June 27, 2022, 12:22 p.m.
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| iso_compute_stats | R Documentation |
Compute stats on isoform expression relative to the total expression of a gene. Flags major and top (most expressed) transcripts
Description
Compute stats on isoform expression relative to the total expression of a gene. Flags major and top (most expressed) transcripts
Usage
iso_compute_stats(count_matrix, count_zeros = TRUE)
Arguments
count_matrix |
Count matrix of seurat object |
count_zeros |
if TRUE (default), features with zero expression are included in the stats |
Value
data.frame with feature/gene_id/transcript_id, (sum) at transcript level relative percentage (perc) over total gene expression, boolean flags for major (maj) and top isoforms
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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