plot_marker_score: Volcano-like plot showing log_f2c vs p-value for genes found...
In atienza-ipmc/isoswitch: What the Package Does (One Line, Title Case)
plot_marker_score R Documentation
Volcano-like plot showing log_f2c vs p-value for genes found in marker_list
returned by ISO_SWITCH_ALL
Description
Volcano-like plot showing log_f2c vs p-value for genes found in marker_list
returned by ISO_SWITCH_ALL
Usage
plot_marker_score(obj, markers, facet = FALSE, ncol = 4, overlaps = 10)
Arguments
obj
Seurat object
markers
List of markers returned by ISO_SWITCH_ALL
facet
if TRUE, facet by individual cell type, defaults to FALSE
ncol
specifies number of columns if facet=TRUE, defaults to 4
overlaps
max number of overlapping labels, defaults to 10
Value
ggplot object
atienza-ipmc/isoswitch documentation built on June 27, 2022, 12:22 p.m.
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| plot_marker_score | R Documentation |
Volcano-like plot showing log_f2c vs p-value for genes found in marker_list returned by ISO_SWITCH_ALL
Description
Volcano-like plot showing log_f2c vs p-value for genes found in marker_list returned by ISO_SWITCH_ALL
Usage
plot_marker_score(obj, markers, facet = FALSE, ncol = 4, overlaps = 10)
Arguments
obj |
Seurat object |
markers |
List of markers returned by ISO_SWITCH_ALL |
facet |
if TRUE, facet by individual cell type, defaults to FALSE |
ncol |
specifies number of columns if facet=TRUE, defaults to 4 |
overlaps |
max number of overlapping labels, defaults to 10 |
Value
ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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