Files in aursiber/DRomics
Dose Response for Omics
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
.lintr
DESCRIPTION
NAMESPACE
NEWS.md
R/PCAdataplot.R
R/RNAseqdata.R
R/bmdboot.R
R/bmdcalc.R
R/bmdfilter.R
R/bmdplot.R
R/bmdplotwithgradient.R
R/continuousanchoringdata.R
R/curvesplot.R
R/drcfit.R
R/ecdfplotwithCI.R
R/ecdfquantileplot.R
R/formatdata4DRomics.R
R/itemselect.R
R/metabolomicdata.R
R/microarraydata.R
R/omicdata.R
R/onAttach.R
R/selectgroups.R
R/sensitivityplot.R
R/targetplot.R
R/trendplot.R
R/util-basicandfitfunc.R
R/util-plotfunc.R
README.md
_pkgdown.yml
data/Scenedesmus_apical.rda
data/Scenedesmus_metab.rda
data/Zhou_kidney_pce.rda
data/zebraf.rda
inst/CITATION
inst/DRomics-shiny/apt.txt
inst/DRomics-shiny/global.R
inst/DRomics-shiny/install.R
inst/DRomics-shiny/rinstall.txt
inst/DRomics-shiny/server.R
inst/DRomics-shiny/ui.R
inst/DRomics-shiny/www/LogoHelmholtz.jpg
inst/DRomics-shiny/www/LogoUniversiteLorraine.png
inst/DRomics-shiny/www/flag_yellow_high.jpg
inst/DRomics-shiny/www/informations_FDR_choice.txt
inst/DRomics-shiny/www/informations_bmdcalc_results.txt
inst/DRomics-shiny/www/informations_datafile_input.txt
inst/DRomics-shiny/www/informations_metabolo_pretreatment.txt
inst/DRomics-shiny/www/informations_modelling_procedure.txt
inst/DRomics-shiny/www/informations_norm_methods.txt
inst/DRomics-shiny/www/informations_select_methods.txt
inst/DRomics-shiny/www/informations_transfo_methods.txt
inst/DRomics-shiny/www/informations_z_x.txt
inst/DRomics-shiny/www/intro.txt
inst/DRomics-shiny/www/logoLiec.png
inst/DRomics-shiny/www/logoLyon1.png
inst/DRomics-shiny/www/logoVetAgroSup.jpg
inst/DRomics-shiny/www/logodromics-dr.png
inst/DRomics-shiny/www/logodromics.png
inst/DRomicsInterpreter-shiny/apt.txt
inst/DRomicsInterpreter-shiny/global.R
inst/DRomicsInterpreter-shiny/install.R
inst/DRomicsInterpreter-shiny/rinstall.txt
inst/DRomicsInterpreter-shiny/server.R
inst/DRomicsInterpreter-shiny/ui.R
inst/DRomicsInterpreter-shiny/www/LogoUniversiteLorraine.png
inst/DRomicsInterpreter-shiny/www/intro.txt
inst/DRomicsInterpreter-shiny/www/logoLyon1.png
inst/DRomicsInterpreter-shiny/www/logoVetAgroSup.jpg
inst/DRomicsInterpreter-shiny/www/logodromics-dr.png
inst/DRomicsInterpreter-shiny/www/logodromics.png
inst/WORDLIST
inst/extdata/RNAseq_sample.txt
inst/extdata/apical_anchoring.txt
inst/extdata/insitu_RNAseq_sample.txt
inst/extdata/metabolo_sample.txt
inst/extdata/transcripto_sample.txt
inst/extdata/transcripto_very_small_sample.txt
inst/extdata/triclosanSVcontigannot.txt
inst/extdata/triclosanSVcontigres.txt
inst/extdata/triclosanSVmetabannot.txt
inst/extdata/triclosanSVmetabres.txt
inst/hexsticker/hexsticker.R
inst/hexsticker/icon.png
man/PCAdataplot.Rd
man/RNAseqdata.Rd
man/Scenedesmus.Rd
man/Zhou.Rd
man/bmdboot.Rd
man/bmdcalc.Rd
man/bmdfilter.Rd
man/bmdplot.Rd
man/bmdplotwithgradient.Rd
man/continuousanchoringdata.Rd
man/curvesplot.Rd
man/drcfit.Rd
man/ecdfplotwithCI.Rd
man/ecdfquantileplot.Rd
man/figures/hexsticker.png
man/formatdata4DRomics.Rd
man/itemselect.Rd
man/metabolomicdata.Rd
man/microarraydata.Rd
man/selectgroups.Rd
man/sensitivityplot.Rd
man/targetplot.Rd
man/trendplot.Rd
man/zebraf.Rd
share/techdoc/CheatSheet/CheatSheetFigs.R
share/techdoc/CheatSheet/DRomics.pdf
share/techdoc/CheatSheet/DRomics.png
share/techdoc/CheatSheet/DRomics.pptx
share/techdoc/CheatSheet/bmdplot4CS.jpg
share/techdoc/CheatSheet/bmdplotwithgradient4CS.jpg
share/techdoc/CheatSheet/curvesplot4CS.jpg
share/techdoc/CheatSheet/inputdata.JPG
share/techdoc/CheatSheet/sensitivityplot4CS.jpg
share/techdoc/CheatSheet/trendplot4CS.jpg
share/techdoc/DRomicsTODOlist.xlsx
share/techdoc/PaperFigs.R
share/techdoc/Scripts4testsONbigdata/scriptonBIGDATAwithres.R
share/techdoc/drcfit081223_save.R
share/techdoc/functions2add/Venndiag3selections.R
share/techdoc/functions2add/codepieces4scaleinlog.R
share/techdoc/functions2add/similaritycalc.R
share/techdoc/olddatafiles/triclosanSVcontigannot.txt
share/techdoc/olddatafiles/triclosanSVcontigres.txt
share/techdoc/olddatafiles/triclosanSVmetabannot.txt
share/techdoc/olddatafiles/triclosanSVmetabres.txt
share/techdoc/workflow2.docx
share/todolist.md
tests/testthat.R
tests/testthat/testAIC.R
tests/testthat/test_windows_bmdcalc.R
tests/testthat/test_windows_drcfit.R
tests/testthat/test_windows_itemselect.R
tests/testthat/testbmdcalc.R
tests/testthat/testbmdplotwithgradient.R
tests/testthat/testplotfit.R
tests/testthat/testresidualtests.R
tests/testthat/testscaling.R
tests/testthat/testselectgroups.R
tests/testthat/testsensitivityplot.R
tests/testthat/testwithNAvalues.R
tests/testthat/testwithRNAseq.R
tests/testthat/testwithanchoringdata.R
tests/testthat/testwithinsitudata.R
tests/testthat/testwithmetabolomic.R
tests/testthat/testwithmicroarray.R
tests/testthat/testwithnoreplicate.R
vignettes/DRomics_vignette.Rmd
