fg_data_fca: fg_data_fca

In aya49/flowGraph: Identifying differential cell populations in flow cytometry data accounting for marker frequency

fg_data_fca

Description

fg_data_fca

Usage

fg_data_fca

Format

A list containing the following elements derived from the flowCAP-II AML data set for cell populations up to layer 3.

• count: A numeric sample x cell population node matrix with cell count values.

• meta: A data frame containing meta information on samples in count; it contains columns:

  • class: a string indicating whether a sample is from a "control" or "aml" subject.

  • id: a string containing sample id's.

  • train: a logical variable indicating whether a sample is from the train or test set.

  • subject: a numeric variable containing the id of the subject from whom the sample came from.

  • tube: the tube or panel number; all samples in this data set is analyzed under the 6th panel.

Source

\insertRef

aghaeepour2013criticalflowGraph

aya49/flowGraph documentation built on Feb. 4, 2024, 6:40 p.m.