fg_rm_feature: Removes a feature.

In aya49/flowGraph: Identifying differential cell populations in flow cytometry data accounting for marker frequency

Removes a feature.

Description

Removes a feature from a given flowGraph object.

Usage

fg_rm_feature(fg, type = "node", feature = NULL)

Arguments

fg	flowGraph object.
type	A string specifying the type of the feature being removed i.e. 'node' or 'edge'.
feature	A string indicating the unique name of the feature removed; note we cannot remove the 'node' 'count' feature type.

Details

fg_rm_feature removes a specified feature matrix from the given flowGraph object fg updating slots feat and feat_desc. See flowGraph-class slot feat and feat_desc for what should be in these slots.

Value

flowGraph object with specified feature removed.

See Also

flowGraph-class fg_add_feature fg_get_feature fg_get_feature_desc fg_rm_summary

Examples

 no_cores <- 1
 data(fg_data_pos30)
 fg <- flowGraph(fg_data_pos30$count, class=fg_data_pos30$meta$class,
                 no_cores=no_cores)
 fg_get_feature_desc(fg)

 fg <- fg_rm_feature(fg, type="node", feature="prop")
 fg_get_feature_desc(fg)

aya49/flowGraph documentation built on Feb. 4, 2024, 6:40 p.m.