lg.format: Format a data.frame in long format and annotate columns

In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

Format a data.frame in long format and annotate columns

Description

Format a data.frame in long format and annotate columns

Usage

lg.format(DF, RowNames = TRUE, TRow = "Gene", categoriesA, categoriesB,
  nameA = "condition", nameB = "study", col1 = "variable")

Arguments

DF	a data.frame
RowNames	weither the rownames should be included as new column
TRow	Name of the column for the row.names. Default="Gene".
categoriesA	vector comprising the different string that should be look into the column names of the input data.frame
categoriesB	vector comprising the different string that should be look into the column names of the input data.frame
nameA	Name of the new column to add for categoriesA in the result data.frame
nameB	Name of the new column to add for categoriesB in the result data.frame
col1	the name of the column to parse for the categories. default: "variable" (default name given by reshape2::melt for expression data.frame )

Value

a long data.frame

barzine/barzinePhdR documentation built on Nov. 23, 2024, 8:54 p.m.