selectSpecific: Select specifically the genes that are expressed above a...

In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

Select specifically the genes that are expressed above a threshold for a given number of times in a data.frame

Description

Select specifically the genes that are expressed above a threshold for a given number of times in a data.frame

Usage

selectSpecific(DF, threshold = 0, expBreadth = 1, verbose = TRUE)

Arguments

DF	numeric (expression) data.frame
threshold	numeric; default: 0. Minimal expression to be considered
expBreadth	integer; default: 1. Exact number of times to be expressed to be considered
verbose	boolean; default: TRUE. Print the number of rows of the returned data.frame

Value

a data.frame that contains genes (ie rows) that are expressed exactly a number of times (expBreadth) above the given threshold

barzine/barzinePhdR documentation built on Nov. 23, 2024, 8:54 p.m.