wrap.scatplot.log2: Wrapper automating the creation of scatter plots...
In barzine/barzinePhdR: Code developed while and for my PhD thesis at the EMBL-EBI

wrap.scatplot.log2

R Documentation

Wrapper automating the creation of scatter plots (scatplot.log2) based on scatplot.log2

Description

Wrapper automating the creation of scatter plots (scatplot.log2) based on scatplot.log2

Usage

wrap.scatplot.log2(DFindex, DF1, DF2, label.df1, label.df2, out.df1,
  out.df2, xmin, xmax, ymin, ymax, a, xcor, ycor, methodcor, fig,
  abline = FALSE, verbose = TRUE, publi = TRUE, report = TRUE,
  pdf = FALSE)

Arguments

`DFindex`	When used for the output for "identical" (t.test output) should be already sorted
`DF1`	first numeric data.frame
`DF2`	second numeric data.frame
`label.df1`	name on the title for DF1 (and used to create the filename)
`label.df2`	name on the title for DF2 (and used to create the filename)
`out.df1`	name to output on the x-axis (for DF1)
`out.df2`	name to output on the y-axis (for DF2)
`xmin`	lower limit for the x-axis
`xmax`	upper limit for the x-axis
`ymin`	lower limit for the y-axis
`ymax`	upper limit for the y-axis
`a`	numeric; alpha scale
`xcor`	numeric; x coordinate to center the correlation
`ycor`	numeric; y coordinate to center the correlation
`methodcor`	"spearman" or "pearson"
`fig`	switch; "grob"; "all"
`abline`	logical; default: FALSE. Whether x=y should be drawn.
`verbose`	logical; default: TRUE.
`publi`	logical; default: TRUE
`report`	logical; default: TRUE
`pdf`	logical; default: FALSE