truncateDgeTable: Truncate dgeTable into tables of positively and negatively...
In bedapub/ribiosExpression: Expression Analysis with RibiosExpression
View source: R/truncateDgeTable.R
truncateDgeTable R Documentation
Truncate dgeTable into tables of positively and negatively differentially expressed genes according to the pre-defined criteria
Description
Truncate dgeTable into tables of positively and negatively differentially expressed genes according to the pre-defined criteria
Usage
truncateDgeTable(dgeTable)
Arguments
dgeTable
dgeTable A DGEtable defined in ribiosExpression. Notice that the column names returned by limma::topTable are remapped (see limmaTopTable2dgeTable).
Value
A list of two elements: 'pos' and 'neg'. Each contains a dgeTable of positively/negatively regulated genes
References
The logic is described at http://rochewiki.roche.com/confluence/display/BIOINFO/Substream+Algorithm
bedapub/ribiosExpression documentation built on Sept. 2, 2023, 4:37 a.m.
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View source: R/truncateDgeTable.R
| truncateDgeTable | R Documentation |
Truncate dgeTable into tables of positively and negatively differentially expressed genes according to the pre-defined criteria
Description
Truncate dgeTable into tables of positively and negatively differentially expressed genes according to the pre-defined criteria
Usage
truncateDgeTable(dgeTable)
Arguments
dgeTable |
dgeTable A DGEtable defined in ribiosExpression. Notice that the column names returned by limma::topTable are remapped (see limmaTopTable2dgeTable). |
Value
A list of two elements: 'pos' and 'neg'. Each contains a dgeTable of positively/negatively regulated genes
References
The logic is described at http://rochewiki.roche.com/confluence/display/BIOINFO/Substream+Algorithm
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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