computeKNNSuperPoprSynthetic: TODO

In belleau/aicsPaper: Accurate Inference of Genetic Ancestry from Cancer Sequencing

TODO

Description

TODO

Usage

computeKNNSuperPoprSynthetic(
  listEigenvector,
  sample.ref,
  study.annot,
  spRef,
  kList = seq_len(15),
  pcaList = 2:15
)

Arguments

listEigenvector	TODO see return of computePCAsynthetic
sample.ref	TODO
study.annot	a data.frame with one entry from study.annot in the gds
spRef	TODO
kList	TODO array of the k possible values
pcaList	TODO array of the pca dimension possible values

Value

A list TODO with the sample.id and eigenvectors and a table with KNN callfor different K and pca dimension.

Author(s)

Pascal Belleau, Astrid Deschênes and Alexander Krasnitz

Examples

# TODO
listEigenvector <- "TOTO"

belleau/aicsPaper documentation built on Aug. 4, 2022, 1:12 a.m.