Description Usage Arguments Value
This function asseses some frequentist properties when naively fitting Mb to capture histories that are missing data.
| 1 2 3 | 
| N | an integer that is the true population size | 
| p | a vector of size 2 containing the capture and recapture probabilities | 
| occ | an integer that is the number of capture occasions to simulate | 
| K | an integer that is the number of traps to simulate | 
| traptype | a character string specifying the trap type. "single" allows individuals to be caught in at most 1 trap per occasion and "multi" allows individuals to be caught in multiple traps per occasion. | 
| lambda_h | a positive value specifying the parameter for the zero-truncated Poisson hair deposition process (S_ijk|W_ijk=1) | 
| lambda_c | a positive value specifying the parameter for the zero-truncated Poisson cluster deposition process if cluster=TRUE | 
| delta | a numeric value between 0 and 1 specifying the probability a hair sample will be retained in the subsample. This is used if subsampling is done by pooling samples on each occasion and taking a simple random sample. | 
| kappa_h | an integer specifying the number of hair samples to retain per occasion-trap if cluster=FALSE or per occasion-trap-cluster if cluster=TRUE. Used in sub-hair and sub-cluster methods | 
| kappa_t | an integer specifying the number of traps per occasion at which to retain kappa_h hair samples. If no value is specified no trap-level subsampling occurs. Only works when cluster=FALSE. Used in the sub-trap method | 
| cluster | a logical indicating whether or not to simulate from the cluster model (multiple clusters per individual-occasion-trap) | 
| kappa_c | an integer specifying the number of clusters per trap-occasion at which to retain kappa_h hair samples. Only works when cluster=TRUE. Sub-cluster method. | 
| alpha | a numeric value between 0 and 1 specifying the probability that a hair sample produces an individual identification | 
| hettype | ... | 
| sims | the number of simulated data sets to generate and fit Mb to | 
| cores | the number of cores to do the simulation on. A typical for loop is used if cores=1 and the foreach package is used if cores>1 | 
a list with the simulation results (expand later)
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