deposit: This function simulates the hair deposition process
In benaug/Mbmisscap: Mbmisscap

This function simulates the hair deposition process

1 2	deposit(W, lambda_h, traptype = "multi", K, cluster = FALSE, lambda_c = NULL)

`W`	a capture history of dimension N x occ if traptype="single" or N x occ x K if traptype="multi"
`lambda_h`	a positive value specifying the parameter for the zero-truncated Poisson hair deposition process (S_ijk\|W_ijk=1)
`traptype`	a character string specifying the capture process. "single" allows individuals to be caught in at most 1 trap per occasion and "multi" allows individuals to be caught in multiple traps per occasion. If traptype="single", a trap id is randomly assigned to each capture
`K`	an integer that is the number of traps to simulate
`cluster`	a logical indicating whether or not to simulate from the cluster model (multiple clusters per individual-occasion-trap)
`lambda_c`	a positive value specifying the parameter for the zero-truncated Poisson cluster deposition process for the cluster model

S a "hair capture history" containing the number of hair samples deposited by individual i on occasion j in trap k and if for cluster=TRUE, at cluster l. S is of dimension N x occ x K if cluster=FALSE and dimension N x occ x K x Lmax if cluster=TRUE, where Lmax is the maximum observed number of clusters deposited across trap-occasions

benaug/Mbmisscap documentation built on May 12, 2019, 10:56 a.m.